Pathways

data display

We have carefully constructed these lipid pathways based on LIPID MAPS experimental data and data from the literature. LIPID MAPS experimental data obtained from our lipid time course experiments and microarray experiments on RAW264.7 cells treated with Kdo2 lipid-A were mapped to corresponding lipids and genes, respectively.

The data are displayed as series of squares, color-coded with shades of green/red to represent measured levels of repression or induction, respectively.


Eicosanoids media Pathway maps created using VANTED

VANTED is a tool for the visualization and analysis of networks with related experimental data. For more information on VANTED, please refer to: Björn H. Junker, Christian Klukas and Falk Schreiber (2006): VANTED: A system for advanced data analysis and visualization in the context of biological networks. BMC Bioinformatics, 7:109 (http://www.biomedcentral.com/1471-2105/7/109)


Arachidonic Acid Metabolism Pathway maps and pathway files for editing within Pathway Editor

Pathway Editor is a program for managing, visualizing, and editing signaling and metabolic pathways. Pathways may be created from scratch, visualized by opening a .path file, or may be downloaded from the LIPID MAPS website. Measured data may be downloaded by the program and displayed graphically.