Structure Database (LMSD)

Common Name
GalCer(d18:2(4E,8E)(9Me)/18:1(3E)(2OH[S]))
Systematic Name
N-(2S-hydroxy-3E-octadecenoyl)-1-β-galactosyl-4E,8E-9-methyl-octadecasphingadienine
Synonyms
LM ID
LMSP0501AC24
Formula
C43H79NO9
Exact Mass
Calculate m/z
753.575484
Sum Composition
HexCer 37:3;O3
Abbrev Chains
GalCer 19:2;O2/18:1;O
Status
Curated
Show lipids differing only in stereochemistry/bond geometry

Classification

Category
Main Class
Sub Class
Sphingolipids [SP]
Neutral glycosphingolipids [SP05]
Simple Glc series [SP0501]

References

Taxonomy Information

Curated from
NCBI taxonomy class
Reference
Aspergillus fumigatus (#746128)
Eurotiomycetes (#147545)
Sphingolipids from the human fungal pathogen Aspergillus fumigatus.,
Biochimie, 2017
Pubmed ID: 28652019

String Representations

InChiKey (Click to copy)
QSPMXWIFLDIBGD-MAABMASZSA-N
InChi (Click to copy)
InChI=1S/C43H79NO9/c1-4-6-8-10-12-13-14-15-16-17-18-20-22-26-31-37(47)42(51)44-35(33-52-43-41(50)40(49)39(48)38(32-45)53-43)36(46)30-27-23-25-29-34(3)28-24-21-19-11-9-7-5-2/h26-27,29-31,35-41,43,45-50H,4-25,28,32-33H2,1-3H3,(H,44,51)/b30-27+,31-26+,34-29+/t35-,36+,37-,38+,39-,40-,41+,43+/m0/s1
SMILES (Click to copy)
[C@](CO[C@H]1[C@H](O)[C@@H](O)[C@@H](O)[C@@H](CO)O1)([H])(NC([C@@H](O)/C=C/CCCCCCCCCCCCCC)=O)[C@]([H])(O)/C=C/CC/C=C(\C)/CCCCCCCCC

Other Databases

PubChem CID
134812573

Calculated Physicochemical Properties

Heavy Atoms 53
Rings 1
Aromatic Rings 0
Rotatable Bonds 33
Van der Waals Molecular Volume 819.65
Topological Polar Surface Area 171.01
Hydrogen Bond Donors 7
Hydrogen Bond Acceptors 10
logP 9.94
Molar Refractivity 218.32

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Created at
-
Updated at
24th Mar 2021