Structure Database (LMSD)
Common Name
GalNAc-GD1a(d18:1/26:1(17Z))
Systematic Name
GalNAcβ1-4(NeuAcα2-3)Galβ1-3GalNAcβ1-4(NeuAcα2-3)Galβ1-4Glcβ-Cer(d18:1/26:1(17Z))
Synonyms
LM ID
LMSP0601BG08
Formula
Exact Mass
Calculate m/z
2150.161005
Sum Composition
Status
Computationally Generated
3D model of GalNAc-GD1a(d18:1/26:1(17Z))
Please note: Where there are chiral atoms but the stereochemistry is undefined, the 3D model takes an arbitrary conformation
Classification
Category
Main Class
Sub Class
Biological Context
String Representations
InChiKey (Click to copy)
CRIIVMKNOQKYFJ-PTFCHYRJSA-N
InChi (Click to copy)
InChI=1S/C100H175N5O44/c1-7-9-11-13-15-17-19-21-22-23-24-25-26-27-28-29-30-32-34-36-38-40-42-44-70(122)105-59(60(117)43-41-39-37-35-33-31-20-18-16-14-12-10-8-2)54-136-94-81(129)80(128)84(67(51-110)139-94)142-95-82(130)90(148-99(97(132)133)45-61(118)71(101-55(3)113)88(146-99)75(123)63(120)47-106)86(69(53-112)140-95)144-93-74(104-58(6)116)87(78(126)66(50-109)138-93)145-96-83(131)91(85(68(52-111)141-96)143-92-73(103-57(5)115)79(127)77(125)65(49-108)137-92)149-100(98(134)135)46-62(119)72(102-56(4)114)89(147-100)76(124)64(121)48-107/h21-22,41,43,59-69,71-96,106-112,117-121,123-131H,7-20,23-40,42,44-54H2,1-6H3,(H,101,113)(H,102,114)(H,103,115)(H,104,116)(H,105,122)(H,132,133)(H,134,135)/b22-21-,43-41+/t59-,60+,61-,62-,63+,64+,65+,66+,67+,68+,69+,71+,72+,73+,74+,75+,76+,77-,78-,79+,80+,81+,82+,83+,84+,85-,86-,87+,88+,89+,90+,91+,92-,93-,94+,95-,96-,99-,100-/m0/s1
SMILES (Click to copy)
[C@](CO[C@@H]1O[C@H](CO)[C@@H](O[C@@H]2O[C@H](CO)[C@H](O[C@@H]3O[C@H](CO)[C@H](O)[C@H](O[C@@H]4O[C@H](CO)[C@H](O[C@@H]5O[C@H](CO)[C@H](O)[C@H](O)[C@H]5NC(=O)C)[C@H](O[C@]5(O[C@@]([H])([C@H](O)[C@H](O)CO)[C@H](NC(=O)C)[C@@H](O)C5)C(O)=O)[C@H]4O)[C@H]3NC(=O)C)[C@H](O[C@]3(O[C@@]([H])([C@H](O)[C@H](O)CO)[C@H](NC(=O)C)[C@@H](O)C3)C(O)=O)[C@H]2O)[C@H](O)[C@H]1O)([H])(NC(CCCCCCCCCCCCCCC/C=C\CCCCCCCC)=O)[C@]([H])(O)/C=C/CCCCCCCCCCCCC
Other Databases
PubChem CID
Calculated Physicochemical Properties
Heavy Atoms
149
Rings
7
Aromatic Rings
0
Rotatable Bonds
70
Van der Waals Molecular Volume
2070.04
Topological Polar Surface Area
788.64
Hydrogen Bond Donors
28
Hydrogen Bond Acceptors
44
logP
10.44
Molar Refractivity
544.75
Admin
Created at
-
Updated at
21st Jul 2021