Structure Database (LMSD)
Common Name
KDNGD1a(d18:1/16:0)
Systematic Name
KDNα2-3Galβ1-3GalNAcβ1-4(KDNα2-3)Galβ1-4Glcβ-Cer(d18:1/16:0)
Synonyms
LM ID
LMSP0601DE01
Formula
Exact Mass
Calculate m/z
1726.887683
Sum Composition
Status
Computationally Generated
3D model of KDNGD1a(d18:1/16:0)
Please note: Where there are chiral atoms but the stereochemistry is undefined, the 3D model takes an arbitrary conformation
Classification
Category
Main Class
Sub Class
Biological Context
String Representations
InChiKey (Click to copy)
HMRKZSMDMGGNAU-XMNHQRAWSA-N
InChi (Click to copy)
InChI=1S/C78H138N2O39/c1-4-6-8-10-12-14-16-18-20-22-24-26-28-30-43(88)42(80-52(93)31-29-27-25-23-21-19-17-15-13-11-9-7-5-2)40-108-72-61(101)60(100)64(50(38-85)111-72)113-74-63(103)70(119-78(76(106)107)33-45(90)55(95)68(117-78)57(97)47(92)35-82)65(51(39-86)112-74)114-71-53(79-41(3)87)66(58(98)48(36-83)109-71)115-73-62(102)69(59(99)49(37-84)110-73)118-77(75(104)105)32-44(89)54(94)67(116-77)56(96)46(91)34-81/h28,30,42-51,53-74,81-86,88-92,94-103H,4-27,29,31-40H2,1-3H3,(H,79,87)(H,80,93)(H,104,105)(H,106,107)/b30-28+/t42-,43+,44-,45-,46+,47+,48+,49+,50+,51+,53+,54+,55+,56+,57+,58-,59-,60+,61+,62+,63+,64+,65-,66+,67+,68+,69-,70+,71-,72+,73-,74-,77-,78-/m0/s1
SMILES (Click to copy)
[C@](CO[C@@H]1O[C@H](CO)[C@@H](O[C@@H]2O[C@H](CO)[C@H](O[C@@H]3O[C@H](CO)[C@H](O)[C@H](O[C@@H]4O[C@H](CO)[C@H](O)[C@H](O[C@]5(O[C@@]([H])([C@H](O)[C@H](O)CO)[C@H](O)[C@@H](O)C5)C(O)=O)[C@H]4O)[C@H]3NC(=O)C)[C@H](O[C@]3(O[C@@]([H])([C@H](O)[C@H](O)CO)[C@H](O)[C@@H](O)C3)C(O)=O)[C@H]2O)[C@H](O)[C@H]1O)([H])(NC(CCCCCCCCCCCCCCC)=O)[C@]([H])(O)/C=C/CCCCCCCCCCCCC
Other Databases
PubChem CID
Calculated Physicochemical Properties
Heavy Atoms
119
Rings
6
Aromatic Rings
0
Rotatable Bonds
55
Van der Waals Molecular Volume
1635.41
Topological Polar Surface Area
680.81
Hydrogen Bond Donors
25
Hydrogen Bond Acceptors
39
logP
6.79
Molar Refractivity
428.19
Admin
Created at
-
Updated at
21st Jul 2021