Structure Database (LMSD)
Systematic Name
GalNAcβ1-4(NeuAcα2-3)Galβ1-3GlcNAcβ1-3(GalNAcβ1-4)Galβ1-4Glcβ-Cer(d18:1/16:0)
Synonyms
LM ID
LMSP0601DQ01
Formula
Exact Mass
Calculate m/z
1924.00411
Sum Composition
Status
Computationally Generated
3D model of
Please note: Where there are chiral atoms but the stereochemistry is undefined, the 3D model takes an arbitrary conformation
Classification
Category
Main Class
Sub Class
Biological Context
String Representations
InChiKey (Click to copy)
MYKFMSUGWZUYTO-XKKLPNCYSA-N
InChi (Click to copy)
InChI=1S/C87H153N5O41/c1-7-9-11-13-15-17-19-21-23-25-27-29-31-33-49(104)48(92-58(107)34-32-30-28-26-24-22-20-18-16-14-12-10-8-2)43-120-83-70(115)69(114)73(55(40-97)124-83)127-84-71(116)78(74(56(41-98)125-84)128-80-60(89-45(4)101)67(112)64(109)52(37-94)121-80)131-82-62(91-47(6)103)76(66(111)54(39-96)123-82)130-85-72(117)79(75(57(42-99)126-85)129-81-61(90-46(5)102)68(113)65(110)53(38-95)122-81)133-87(86(118)119)35-50(105)59(88-44(3)100)77(132-87)63(108)51(106)36-93/h31,33,48-57,59-85,93-99,104-106,108-117H,7-30,32,34-43H2,1-6H3,(H,88,100)(H,89,101)(H,90,102)(H,91,103)(H,92,107)(H,118,119)/b33-31+/t48-,49+,50-,51+,52+,53+,54+,55+,56+,57+,59+,60+,61+,62+,63+,64-,65-,66+,67+,68+,69+,70+,71+,72+,73+,74-,75-,76+,77+,78+,79+,80-,81-,82-,83+,84-,85-,87-/m0/s1
SMILES (Click to copy)
[C@](CO[C@@H]1O[C@H](CO)[C@@H](O[C@@H]2O[C@H](CO)[C@H](O[C@@H]3O[C@H](CO)[C@H](O)[C@H](O)[C@H]3NC(=O)C)[C@H](O[C@@H]3O[C@H](CO)[C@@H](O)[C@H](O[C@@H]4O[C@H](CO)[C@H](O[C@@H]5O[C@H](CO)[C@H](O)[C@H](O)[C@H]5NC(=O)C)[C@H](O[C@]5(O[C@@]([H])([C@H](O)[C@H](O)CO)[C@H](NC(=O)C)[C@@H](O)C5)C(O)=O)[C@H]4O)[C@H]3NC(=O)C)[C@H]2O)[C@H](O)[C@H]1O)([H])(NC(CCCCCCCCCCCCCCC)=O)[C@]([H])(O)/C=C/CCCCCCCCCCCCC
Other Databases
PubChem CID
Calculated Physicochemical Properties
Heavy Atoms
133
Rings
7
Aromatic Rings
0
Rotatable Bonds
58
Van der Waals Molecular Volume
1824.05
Topological Polar Surface Area
731.11
Hydrogen Bond Donors
26
Hydrogen Bond Acceptors
41
logP
7.27
Molar Refractivity
480.96
Admin
Created at
-
Updated at
21st Jul 2021